Showing posts with label teaching. Show all posts
Showing posts with label teaching. Show all posts

Sunday, February 4, 2024

SQUIRRELS: SHADOW TAILS

One of the little animals I see daily in Kitsilano, Vancouver, are the very busy, highly comic rodents we know as squirrels. 

They spend their days busily gathering and caching food and their nights resting from all that hard work. 

My neighbourhood has mostly Eastern Gray squirrels, Sciurus carolinensis (Gmelin, 1788) who come in a colour palette of reddish-brown, grey (British spelling) and black. 

These cuties have bushy tails and a spring in their step — racing around gathering nuts, finding secret hiding spots to cache them, teasing dogs and generally exuding cuteness.

We find the first fossil evidence of tree squirrels in the Pleistocene. At least twenty specimens have been found of Sciurus carolinensis in Pleistocene outcrops in Florida on the eastern coast of the United States. Over time, their body size grew larger then shrunk down to the 400 to 600 g (14 to 21 oz) weight we see them today.  

Eastern Gray squirrels have two breeding seasons in December-January and June-July. This past year was warm. On Vancouver Island, the Eastern Grays bred again in early September. One wonders if the heat dome killed off the July litter, and with the return of more favourable weather, the parents have been induced to breed again.

While they are not native to Vancouver, they are plentiful. They were introduced to the region over a hundred years ago and have been happily multiplying year upon year. 

Our native species are the smaller, reddish-brown, rather shy Douglas squirrels, Tamiasciurus douglasii (Bachman, 1839), and the nocturnal Northern Flying Squirrels, Glaucomys sabrinus (Shaw, 1801).  

Sciurus, is derived from two Greek words, skia, meaning shadow, and oura, meaning tail. The name choice is poetic, alluding to squirrels sitting in the shadow of their tails. 

The specific epithet, carolinensis, refers to the Carolinas on the eastern seaboard of the United States, an area that includes both North and South Carolina. It was here that the species was first recorded and still rather common. In the United Kingdom and Canada, Sciurus carolinensis is referred to as the Eastern Gray or grey squirrel — and though adorable is an invasive species. 

In the United States, Eastern is used to differentiate the species from the Western Gray or Silver-Gray squirrel, Sciurus griseus, (Ord, 1818). 

The Ord here, of course, is George Ord, the American zoologist who named the species based on notes recorded by Lewis and Clark in the early 1800s. If you fancy a read, check out his article from 1815, "Zoology of North America." It is charming, anachronistic and the first systemic zoology of America by an American. 

In the Kwak̓wala language of the Kwakwaka'wakw First Nation, speakers of Kwak'wala, of the Pacific Northwest, we use the word ta̱minasux̱, to say: "that is a squirrel." 

The word for shadow in Kwak'wala is gagumas and tail is ha̱t̕sa̱x̱ste' — so I will think of these wee wonders of the Order Rodentia in the family Sciuridae as the Gagumas ha̱t̕sa̱x̱ste' of Khahtsahlano. 

Saturday, February 3, 2024

OPHTHALMOPLAX BRASILIANA

Ophthalmoplax brasiliana  / Photo: José F. Ventura‎
Ventral view of the carnivorous portunoid crab Ophthalmoplax brasiliana (Maury, 1930) from the latest Maastrichtian (~66.2 Ma.) deposits near Coahuila, northern Mexico.

This marine species was originally thought to have been found only in the upper Member (Owl Creek Formation) Late/Upper Maastrichtian deposits of Tippah County in Mississippi, USA. 

Sohl and Koch published on the Mississippian finds in the USGS in 1983. Fedorov and Nyborg published on this same species again in 2017. Paleocoordinates: (34.8° N, 88.9° W: 38.3° N, 66.2° W)

Sunday, January 28, 2024

THE SLOW RACE OF TIME: LIVING FOSSILS

Horseshoe crabs are marine and brackish water arthropods of the order Xiphosura — a slowly evolving, conservative taxa.

Much like (slow) Water Striders (Aquarius remigis), (relatively sluggish) Coelacanth (Latimeria chalumnae) and (the current winner on really slow evolution) Elephant Sharks (Callorhinchus milii), these fellows have a long history in the fossil record with very few anatomical changes. 

But slow change provides loads of great information. It makes our new friend, Yunnanolimulus luoingensis, an especially interesting and excellent reference point for how this group evolved. 

We can examine their genome today and make comparisons all the way back to the Middle Triassic (with this new find) and other specimens from further back in the Ordovician — 445 million years ago. 

These living fossils have survived all five mass extinction events. They are generalists who can live in shallow or deep water and will eat pretty much anything they can find on the seafloor.

The oldest horseshoe crab fossil, Lunataspis aurora, is found in outcrops in Manitoba, Canada. Charmingly, the name means crescent moon shield of the dawn. It was palaeontologist Dave Rudkin and team who chose that romantic name. Finding them as fossils is quite remarkable as their shells are made of protein which does not mineralized like typical fossils.

Even so, the evolution of their exoskeleton is well-documented by fossils, but appendage and soft-tissue preservation are extremely rare. 

A new study analyzes details of the appendage and soft-tissue preservation in Yunnanolimulus luoingensis, a Middle Triassic (ca. 244 million years old) horseshoe crab from Yunnan Province, SW China. The remarkable anatomical preservation includes the chelicerae, five pairs of walking appendages, opisthosomal appendages with book gills, muscles, and fine setae permits comparison with extant horseshoe crabs.

The close anatomical similarity between the Middle Triassic horseshoe crabs and their recent analogues documents anatomical conservatism for over 240 million years, suggesting persistence of lifestyle.

The occurrence of Carcinoscorpius-type claspers on the first and second walking legs in male individuals of Y. luoingensis tells us that simple chelate claspers in males are plesiomorphic for horseshoe crabs, and the bulbous claspers in Tachypleus and Limulus are derived.

As an aside, if you hadn't seen an elephant shark before and were shown a photo, you would likely say, "that's no freaking shark." You would be wrong, of course, but it would be a very clever observation.

Callorhinchus milii look nothing like our Great White friends and they are not true sharks at all. Rather, they are ghost sharks that belong to the subclass Holocephali (chimaera), a group lovingly known as ratfish. They diverged from the shark lineage about 400 million years ago.

If you have a moment, do a search for Callorhinchus milii. The odd-looking fellow with the ironic name, kallos, which means beautiful in Greek, sports black blotches on a pale silver elongate body. And their special feature? It is the fishy equivalent of business in the front, party in the back, with a dangling trunk-like projection at the tip of their snout and well-developed rectal glands near the tail.

As another small point of interest with regards to horseshoe crabs, John McAllister collected several of these while working on his MSc to see if they had microstructures similar to trilobites (they do) and whether their cuticles were likewise calcified. He found no real calcification in their cuticles, in fact, he had a rather frustrating time getting anything measurable to dissolve in acid in his hunt for trace elements. 

Likewise, when looking at oxygen isotopes (16/18) to get a handle on water salinity and temperature, his contacts at the University of Waterloo had tons of fun getting anything at all to analyze. It made for some interesting findings. Sadly, for a number of reasons, he abandoned the work, but you can read his very interesting thesis here: https://dr.library.brocku.ca/handle/10464/1959

Ref: Hu, Shixue & Zhang, Qiyue & Feldmann, Rodney & Benton, Michael & Schweitzer, Carrie & Huang, Jinyuan & Wen, Wen & Zhou, Changyong & Xie, Tao & Lü, Tao & Hong, Shuigen. (2017). Exceptional appendage and soft-tissue preservation in a Middle Triassic horseshoe crab from SW China. Scientific Reports. 7. 10.1038/s41598-017-13319-x.

Saturday, January 6, 2024

JOSE BONAPARTE: MASTER OF THE MESOZOIC

One of the most delightful palaeontologists to grace our Earth was José Fernando Bonaparte (14 June 1928 – 18 February 2020). 

We often think of those who have shaped our past and found many of the firsts of their region as living in ancient history, but José left us just this past year in February. 

He was a prolific and hard-working Argentinian palaeontologist who you'll know as the discoverer of some of Argentina's iconic dinosaurs — Carnotaurus, along with Amargasaurus, Abelisaurus, Argentinosaurus and Noasaurus. 

His first love was mammals and over the course of his career, he unearthed the remains of some of the first South American fossil mammals from the Mesozoic. 

Between 1975 and 1977, Bonaparte worked on excavation of the Saltasaurus dinosaur with Martín Vince and Juan C. Leal at the Estancia "El Brete."  Bonaparte was interested in the anatomy of Saltasaurus, particularly the armoured plates or osteoderms embedded in its skin. 

Based on this discovery, together with twenty examples of Kritosaurus australis and a lambeosaurine dinosaur found in South America, Bonaparte hypothesized that there had been a large-scale migration of species between the Americas at the end of the Mesozoic period.

The supercontinent of Pangea split into Laurasia in the north and Gondwana in the south during the Jurassic. During the Cretaceous, South America pulled away from the rest of Gondwana. The division caused a divergence between the northern biota and the southern biota, and the southern animals appear strange to those used to the more northerly fauna. 

Bonaparte's finds illustrate this divergence. His work is honoured in his moniker given to him by palaeontologist Robert Bakker — "Master of the Mesozoic."

If you fancy a listen, he is the honoured guest in absentia on an episode of the Fossil Huntress Podcast. You can find the link here to listen: https://anchor.fm/.../Jos-Bonaparte-Master-of-the...


Monday, January 1, 2024

DINOFLAGELLATES: TEENSY OCEAN STARS

This showy Christmas Cracker is a Dinoflagellate

The showy royal blue Christmas cracker looking fellow you see here is a dinoflagellate. 

Bioluminescent dinoflagellates are a type of plankton — teensy marine organisms that make the seaways shimmer as you swim through them or the tide crashes them against the shore. 

The first modern dinoflagellate was described by Baker in 1753, the first species was formally named by Muller in 1773. 

The first fossil forms were described by Ehrenberg in the 1830s from Cretaceous outcrops. More dinoflagellates have lived, died and gone extinct than there are living today. We know them mainly from fossil dinocysts dating back to the Triassic. They are one of the most primitive of the eukaryotic group with a fossil record that may extend into the Precambrian. They combine primitive characteristics of prokaryotes and advanced eukaryotic features.

The luciferase found in dinoflagellates is related to the green chemical chlorophyll found in plants. Their twinkling lights are brief, each containing about 100 million photons that shine for only a tenth of a second. While each individual flicker is here and gone in the wink of an eye, en masse they are breathtaking. I have spent several wondrous evenings scuba diving amongst these glittering denizens off our shores. What you know about light above the surface does not hold true for the light you see as bioluminescence. Its energy and luminosity come from a chemical reaction. 

In a luminescent reaction, two types of chemicals — luciferin and luciferase — combine together. Together, they produce cold light — light that generates less than 20% thermal radiation or heat. 

The light you see is produced by a compound called Luciferin. It is the shiny, showy bit in this chemical show. Luciferase acts as an enzyme, the substance that acts as a catalyst controlling the rate of chemical reactions, allowing the luciferin to release energy as it is oxidized. 

The colour of the light depends on the chemical structures of the chemicals. There are more than a dozen known chemical luminescent systems, indicating that bioluminescence evolved independently in different groups of organisms.

Coelenterazine is the type of luciferin we find in shrimp, fish and jellyfish. Dinoflagellates and krill share another class of unique luciferins, while ostracods or firefleas and some fish have a completely different luciferin — but all produce lights of various colours to great effect.  

Sunday, November 6, 2022

BARNACLES: K'WITA'A

One of the most interesting and enigmatic little critters we find at the seashore are barnacles. They cling to rocks deep in the sea and at the water's edge, closed to our curiosity, their domed mounds like little closed beaks shut to the water and the world.

They choose their permanent homes as larvae, sticking to hard substrates that will become their permanent homes for the rest of their lives. It has taken us a long time to find how they actually stick or what kind of "glue" they were using.

Remarkably, the barnacle glue sticks to rocks in a similar way to how red cells bind together. Red blood cells bind and clot with a little help from some enzymes. 

These work to create long protein fibres that first bind, clot then form a scab. The mechanism barnacles use, right down to the enzyme, is very similar. That's especially interesting as about a billion years separate our evolutionary path from theirs.

So, with the help of their clever enzymes, they can affix to most anything – ship hulls, rocks, and even the skin of whales. If you find them in tidepools, you begin to see their true nature as they open up, their delicate feathery finger-like projections flowing back and forth in the surf.  I confess, having eaten them, that the larger barnacles are also delicious! Both my dad and grandfather were very fond of them. We would head to Balaklava Island where my father was born to choose some of the yummiest of their kin to make a meal of them.

One of my earliest memories is of playing with them in the tidepools on the north end of Vancouver Island. It was here that I learned their many names. In the Kwak'wala language of my family who are Kwakiutl First Nations of the Pacific Northwest, the word for barnacles is k̕wit̕a̱'a — and if it is a very small barnacle it is called t̕sot̕soma — and the Kwak'wala word for glue is ḵ̕wa̱dayu.

Wednesday, July 14, 2021

EURYPTERIDS: ANCIENT MARINE ARTHROPODS

More commonly known as sea scorpions, the now-extinct eurypterids were arthropods that lived during the Paleozoic. 

We saw the first of their brethren during the Ordovician and the last of them during the End-Permian Mass Extinction Event. 

In between, they thrived and irradiated out to every niche within our ancient seas and many later forms survived and thrived in both brackish and freshwater. 

The group Arthropoda includes invertebrate animals with exoskeletons, segmented bodies, and paired joint appendages. Eurypterids had six sets of appendages. You can clearly see the segmented body on this cutie, which is one of the defining characteristics of arthropods. The first set was modified into pinchers which are used for feeding. The largest appendage visible in this fossil is a broad paddle that E. tetragonophthalmus used to swim.

This first eurypterid, Eurypterus remipes, was discovered in New York in 1818. It is an iconic fossil for this region and was chosen as the state's official fossil in 1984. An excellent choice as most of the productive eurypterid-bearing outcrops are within the state's boundaries. Most of the fossils we find from them, whether body fossils or trace fossils are from fossil sites in North America and Europe This is because the group lived primarily in the waters around and within the ancient supercontinent of Euramerica. 

Only a handful of eurypterid groups spread beyond the confines of Euramerica and a few genera, such as Adelophthalmus — the longest-lived of all known eurypterid genera — and the giant predatory Pterygotus, achieved a cosmopolitan distribution so we find their fossil remains worldwide today. 

Interestingly, the type species, Pterygotus anglicus, was first through to be the remains of a massive fish by Swiss naturalist Louis Agassiz who described it in 1839 — hence the poorly chosen name Pterygotus, which translates to winged fish. He did catch that embarrassing error five years later, but the name remains for all time.